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Chapter 4 · Part 7 of 10
  1. Chapter overview
  2. 1How life's building blocks formed
  3. 2From an RNA world to modern cells
  4. 3Seeing cells, and why they stay small
  5. 4Prokaryotic and eukaryotic cells
  6. 5The cytosol and the cytoskeleton
  7. 6The nucleus, the genome, and the proteome
  8. 7The ER, the Golgi, and the secretory pathway
  9. 8Lysosomes, vacuoles, peroxisomes, and the plasma membrane
  10. 9Mitochondria, chloroplasts, and endosymbiosis
  11. 10How proteins find their organelles

The ER, the Golgi, and the secretory pathway

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The nuclear envelope is just one piece of a larger network. Many of a eukaryotic cell’s membranes are connected, either directly or by small membrane bubbles that shuttle between them, and together they make, modify, and ship the cell’s products.

The endomembrane system

The endomembrane system is this network of internal membranes plus the plasma membrane. It has seven members:

Mitochondria and chloroplasts are not part of the endomembrane system, a favorite exam trap. Materials move between its parts in membrane vesicles, tiny spheres of membrane that bud off one compartment and fuse with another, like shipping containers. The space inside any organelle is its lumen.

The endoplasmic reticulum

The endoplasmic reticulum (ER) (“little net inside the cell”) is a maze of flattened, fluid-filled tubes and sacs called cisternae. Its membrane encloses one continuous space, the ER lumen. The ER comes in two connected forms, rough and smooth, and the rough ER is continuous with the outer membrane of the nuclear envelope.

Rough ER gets its bumpy look from the ribosomes studding its outer surface. It has three jobs:

Smooth ER has no ribosomes. Its large membrane surface holds enzymes for four kinds of work:

Job What happens
Detoxification In liver cells, enzymes turn harmful hydrophobic (water-avoiding) molecules, such as ethanol and barbiturate drugs, into hydrophilic (water-soluble) ones the body can excrete. Heavy drinking expands the smooth ER, one reason alcohol tolerance rises.
Carbohydrate metabolism Liver cells store glucose as glycogen, a long chain of glucose units. When energy is needed, glycogen is broken down to glucose-6-phosphate, and a smooth ER enzyme, glucose-6-phosphatase, removes the phosphate so glucose can leave the cell for the blood.
Calcium storage Pumps move calcium ions (Ca²⁺) into the ER lumen. Releasing them on cue triggers events such as muscle contraction.
Lipid synthesis The smooth ER is the main site for making phospholipids, the main lipids of membranes, and it modifies cholesterol into steroid hormones such as estrogen and testosterone.

The Golgi apparatus

The Golgi apparatus is a stack of flattened membrane sacs, each enclosing its own compartment (cisterna). The side facing the ER is the cis Golgi, the side facing the plasma membrane is the trans Golgi, and the sacs between are the medial Golgi. To keep them straight, think of cis as “this side” (next to the ER) and trans as “across” (as in transatlantic).

The Golgi has three overlapping functions:

How cargo gets from one Golgi sac to the next is still debated. There are two models:

Model What moves A large particle placed in the cis Golgi would…
Vesicular transport Cargo hops forward in vesicles; the sacs stay put stay in the cis Golgi, since it’s too big to fit in a vesicle
Cisternal maturation The sacs themselves move: new cis sacs form from ER vesicles, and each sac matures into medial, then trans, then breaks up into vesicles ride along from cis to medial to trans

The secretory pathway

The route that proteins take to leave the cell is the secretory pathway:

  1. Ribosomes make the protein and feed it into the rough ER.
  2. Vesicles carry it from the ER to the cis Golgi.
  3. It passes through the medial and then the trans Golgi, getting processed along the way.
  4. A secretory vesicle buds from the trans Golgi and carries it to the plasma membrane.
  5. The vesicle fuses with the plasma membrane and releases the protein outside the cell.

Not everything leaving the Golgi is secreted: it also sends vesicles to other destinations, such as lysosomes.

Figure 4.5 A transport vesicle carries cargo from the ER to the cis Golgi. The cargo passes through the medial and then the trans Golgi. A secretory vesicle carries it from the trans Golgi to the plasma membrane. The vesicle fuses with the membrane and releases the cargo outside the cell.

Palade’s pulse-chase experiment

George Palade traced the secretory pathway with a pulse-chase experiment, using pancreas cells because their main job is secreting proteins. First came the pulse: a brief dose of a radioactive amino acid, so only proteins made during those few minutes were labeled. Then came the chase: a flood of ordinary, nonradioactive amino acid, which stopped any further labeling. Think of painting one batch of cars red and watching where they go on the assembly line.

Electron micrographs taken at later and later times showed the labeled proteins first in the rough ER, then in the Golgi, then in secretory vesicles near the plasma membrane. The conclusion: secreted proteins enter the rough ER as they’re made, then pass through a fixed series of compartments, in order, on their way out.

Check yourselfIn a pulse-chase experiment, why is the chase needed?

The chase floods the cells with unlabeled amino acids so they stop making radioactive proteins. Only the batch made during the pulse is labeled, so its movement from compartment to compartment can be tracked over time.

Practice questions

  1. 1 of 2

    Which organelle is a stack of flattened membrane sacs with a cis face toward the ER and a trans face toward the plasma membrane?

  2. 2 of 2

    The liver cells of a person who drinks alcohol heavily develop more of one organelle, which is one reason their alcohol tolerance rises. Which organelle?