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Chapter 4 · Part 9 of 10
  1. Chapter overview
  2. 1How life's building blocks formed
  3. 2From an RNA world to modern cells
  4. 3Seeing cells, and why they stay small
  5. 4Prokaryotic and eukaryotic cells
  6. 5The cytosol and the cytoskeleton
  7. 6The nucleus, the genome, and the proteome
  8. 7The ER, the Golgi, and the secretory pathway
  9. 8Lysosomes, vacuoles, peroxisomes, and the plasma membrane
  10. 9Mitochondria, chloroplasts, and endosymbiosis
  11. 10How proteins find their organelles

Mitochondria, chloroplasts, and endosymbiosis

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Two organelles handle the cell’s energy. Chloroplasts capture light energy and use it to build organic molecules; mitochondria break organic molecules down and store the released energy in ATP. Both are semiautonomous organelles: they grow and divide on their own, but they import most of their proteins and many other parts from the rest of the cell.

Mitochondria

A mitochondrion (plural, mitochondria) is about the size of a bacterium. A typical cell has hundreds to thousands of them, and cells with high energy demands, such as muscle cells, have more. Regular exercise even increases the number and size of mitochondria in your muscles.

Each mitochondrion has two membranes. The space between them is the intermembrane space. The inner membrane is deeply folded into cristae, and the fluid it encloses is the mitochondrial matrix. ATP is made at the inner membrane, so the folds matter: they pack far more membrane, and therefore more ATP-making machinery, into the same small space.

Cutaway of an oval mitochondrion showing a smooth outer membrane, an inner membrane folded into cristae, the narrow intermembrane space between the two membranes, and the matrix filling the interior
Figure 4.6 The cristae are folds of the inner membrane. Folding raises the membrane’s surface area, and with it the cell’s capacity to make ATP.

ATP (adenosine triphosphate) is the energy currency that many proteins spend to do their jobs, from muscle contraction to cell division. Mitochondria make most of a cell’s ATP, but they don’t make energy from nothing. They move energy already stored in sugars, fats, and amino acids into ATP, a form the cell can spend right away: more a currency exchange than a mint.

Mitochondria also help make, modify, and break down molecules (some hormones require mitochondrial enzymes). In brown fat cells they release energy as heat, helping hibernating animals warm up and keeping young animals warm. Mutations that weaken ATP production harm high-demand cells such as neurons and muscle cells most.

Chloroplasts

Chloroplasts carry out photosynthesis: they capture light energy and use it to make organic molecules such as glucose. They’re found in nearly all plants and algae.

Like a mitochondrion, a chloroplast has an outer membrane, an inner membrane, and an intermembrane space. Inside is a third membrane, the thylakoid membrane, which forms flattened, fluid-filled sacs enclosing the thylakoid lumen. The sacs are stacked like coins; each stack is a granum (plural, grana). The fluid surrounding the thylakoids, inside the inner membrane, is the stroma.

Figure 4.7 The thylakoids are a separate, third membrane system, not folds of the inner membrane.
Mitochondrion Chloroplast
Internal membranes Cristae: folds of the inner membrane Thylakoids: a third membrane, stacked into grana
Fluid inside the inner membrane Matrix Stroma (around the thylakoids)

Chloroplasts are one kind of plastid, a family of plant organelles that all develop from unspecialized proplastids. Plastids differ in their pigments and in what they make:

Plastid Pigment What it does
Chloroplast (chloro, green) Green chlorophyll Photosynthesis
Chromoplast (chromo, color) Yellow, orange, and red carotenoids Makes and stores pigments that color fruits, flowers, and autumn leaves
Leucoplast (leuco, white) Usually none Varies; one type, the amyloplast (amylo, starch), makes and stores starch, especially in roots and tubers

Their own DNA, their own division

Mitochondria and chloroplasts have their own genetic material: the mitochondrial genome and chloroplast genome, separate from the nuclear genome. Like a bacterial genome, each is usually a single circular chromosome, though an organelle may hold several copies.

These genomes are tiny. The human nuclear genome holds about 200,000 times as much DNA as the human mitochondrial genome, and about 20,000 protein-coding genes compared with about a dozen. Chloroplast genomes are bigger, roughly 10 times the size of the human mitochondrial genome.

Mitochondria and chloroplasts multiply by binary fission: the organelle copies its chromosome, then splits in two, much as a bacterium does (though a dividing bacterium must also build a new cell wall between the two cells). Cells adjust the numbers to their needs; leaf cells in brighter sunlight, for instance, make more chloroplasts.

Endosymbiosis: bacteria that moved in

Endosymbiosis is a relationship in which a smaller species (the symbiont) lives inside a larger one (the host). The endosymbiosis theory states that mitochondria and chloroplasts descend from bacteria that took up residence inside early eukaryotic cells. Mitochondria came from a group called proteobacteria, and chloroplasts from cyanobacteria, bacteria that carry out photosynthesis. An early eukaryote probably engulfed these bacteria, and over roughly 2 billion years they changed into organelles.

The evidence:

The partnership paid off. The host gained photosynthesis (from cyanobacteria) or much greater ATP production (from proteobacteria), and the bacteria may have gained a stable, nutrient-rich home. DNA comparisons suggest eukaryotes first arose within the domain Archaea, and gaining mitochondria then helped them grow larger, divide faster, and spread into many environments.

Over time, many of the bacteria’s genes moved to the nucleus. Hundreds of the proteins in these organelles are now coded by nuclear genes, made in the cytosol, and imported.

Check yourselfWhich observation would NOT support the endosymbiosis theory: organelle genomes that resemble bacterial chromosomes, division by binary fission, or the presence of ribosomes?

The presence of ribosomes. Every cell has ribosomes, including the host’s own cytosol, so they don’t point to a bacterial origin. Bacteria-like genomes and binary fission both do.

Practice questions

  1. 1 of 2

    Why do muscle cells contain more mitochondria than most other cells?

  2. 2 of 2

    A potato tuber is packed with starch. Which kind of plastid makes and stores that starch?